STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001353annotation not available (158 aa)    
Predicted Functional Partners:
CORO1A
Coronin 1A.
   
   0.931
CORO1C
Coronin 1C.
   
   0.929
CORO6
Coronin 6.
    
   0.918
ENSODEP00000014825
annotation not available
   
 
 0.821
ANLN
Anillin actin binding protein.
    
 
 0.815
CFL2
Cofilin 2.
   
 0.788
PTPRCAP
Protein tyrosine phosphatase receptor type C associated protein.
   
  
 0.757
PLEC
Plectin.
    
 
 0.754
ENSODEP00000003121
annotation not available
   
 0.737
LOC101578712
annotation not available
   
 0.737
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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