Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN7Tetraspanin 7. (249 aa)    
Predicted Functional Partners:
PICK1
Protein interacting with PRKCA 1.
    
 0.965
ENSODEP00000015747
annotation not available
   
    0.928
ENSODEP00000019267
annotation not available
   
    0.928
PRRG1
Proline rich and Gla domain 1.
    
 
 0.781
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.766
ENSODEP00000024866
annotation not available
    
 0.751
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.742
GGCX
Gamma-glutamyl carboxylase.
    
   0.741
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.728
CD19
CD19 molecule.
    
 0.717
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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