STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM13CFamily with sequence similarity 13 member C. (578 aa)    
Predicted Functional Partners:
EXOC8
Exocyst complex component 8.
    
 0.808
EXOC4
Exocyst complex component 4.
     
 0.782
EXOC1
Exocyst complex component 1.
   
 
  0.781
ENSODEP00000009204
annotation not available
     
 0.752
Exoc7
annotation not available
     
 0.752
EXOC6
Exocyst complex component 6.
     
 0.741
EXOC6B
Exocyst complex component 6B.
     
 0.741
AHCYL1
Adenosylhomocysteinase like 1.
    
   0.690
ENSODEP00000014156
annotation not available
    
 0.581
ENSODEP00000021414
annotation not available
    
 0.581
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.