STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001358annotation not available (497 aa)    
Predicted Functional Partners:
ENSODEP00000007129
annotation not available
     
  0.870
ENSODEP00000007791
annotation not available
    
 
 0.840
ENSODEP00000009826
annotation not available
    
 
 0.840
LOC101588526
ATP synthase subunit beta, mitochondrial.
    
 
 0.840
ENSODEP00000002124
annotation not available
    
   0.713
ENSODEP00000007788
annotation not available
    
   0.713
ENSODEP00000012936
annotation not available
    
   0.713
IRF2BP2
Interferon regulatory factor 2 binding protein 2.
     
  0.648
IRF2BP1
Interferon regulatory factor 2 binding protein 1.
     
  0.648
CD164L2
CD164 molecule like 2.
    
   0.641
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.