STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP2ACharged multivesicular body protein 2A. (222 aa)    
Predicted Functional Partners:
ENSODEP00000013927
annotation not available
   
 0.998
ENSODEP00000020685
annotation not available
    
 0.998
CHMP4C
Charged multivesicular body protein 4C.
   
 0.997
VPS4B
Vacuolar protein sorting 4 homolog B.
    
 0.997
ENSODEP00000009754
annotation not available
    
 0.996
ENSODEP00000000950
annotation not available
   
 0.995
ENSODEP00000016789
annotation not available
   
 0.995
ENSODEP00000023293
annotation not available
   
 0.995
ENSODEP00000027002
annotation not available
   
 0.995
ENSODEP00000003678
annotation not available
   
 0.994
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.