STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP2ACharged multivesicular body protein 2A. (222 aa)    
Predicted Functional Partners:
ENSODEP00000013927
annotation not available
   
 0.998
ENSODEP00000001811
annotation not available
   
0.997
CHMP1A
Charged multivesicular body protein 1A.
   
0.997
VPS4B
Vacuolar protein sorting 4 homolog B.
    
 0.996
ENSODEP00000020685
annotation not available
    
 0.996
Tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.995
ENSODEP00000003975
annotation not available
   
0.995
ENSODEP00000005679
annotation not available
   
0.995
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.995
ENSODEP00000011232
annotation not available
   
0.995
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.