STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB31RAB31, member RAS oncogene family. (175 aa)    
Predicted Functional Partners:
RAB22A
RAB22A, member RAS oncogene family.
   
  0.999
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.990
ENSODEP00000020619
annotation not available
   
 0.978
CHM
CHM Rab escort protein.
    
 0.969
RBSN
Rabenosyn, RAB effector.
    
 0.937
EEA1
Early endosome antigen 1.
    
 0.926
ENSODEP00000003271
annotation not available
    
 0.917
ENSODEP00000005452
annotation not available
    
 0.917
GDI1
GDP dissociation inhibitor 1.
    
 0.917
ENSODEP00000010922
annotation not available
    
 0.917
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.