STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STXBP6Syntaxin binding protein 6. (210 aa)    
Predicted Functional Partners:
STX4
Syntaxin 4.
    
 0.985
EXOC1
Exocyst complex component 1.
  
 
0.982
STX3
Syntaxin 3.
    
 0.973
STX12
Syntaxin 12.
    
 
 0.956
NAPA
NSF attachment protein alpha.
    
 
 0.955
STX8
Syntaxin 8.
    
 
 0.934
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.934
STX6
Syntaxin 6.
    
 
 0.931
PRKCI
Protein kinase C iota.
    
 0.917
PRKCZ
Protein kinase C zeta.
    
 0.917
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.