STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP6NLUSP6 N-terminal like. (844 aa)    
Predicted Functional Partners:
ENSODEP00000003151
annotation not available
    
 0.955
ENSODEP00000025559
annotation not available
    
 0.955
RAB19
RAB19, member RAS oncogene family.
    
 0.941
RABL6
RAB, member RAS oncogene family like 6.
    
 0.799
RAB33B
RAB33B, member RAS oncogene family.
    
 0.782
FILIP1L
Filamin A interacting protein 1 like.
    
 0.782
ENSODEP00000009240
annotation not available
    
 0.782
ENSODEP00000015228
annotation not available
    
 0.782
RAB33A
RAB33A, member RAS oncogene family.
    
 0.782
ENSODEP00000019545
annotation not available
    
 0.782
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.