STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001396annotation not available (70 aa)    
Predicted Functional Partners:
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.924
PCGF6
Polycomb group ring finger 6.
    
 0.922
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.917
ENSODEP00000001576
annotation not available
   
 0.899
ENSODEP00000017510
annotation not available
   
 0.899
RING1
Ring finger protein 1.
    
 0.898
ENSODEP00000000633
annotation not available
   
   0.895
TRIM28
Tripartite motif containing 28.
    
 0.895
ENSODEP00000023580
annotation not available
   
   0.895
RNF2
Ring finger protein 2.
    
 0.894
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.