STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTM1Myotubularin 1. (599 aa)    
Predicted Functional Partners:
SACM1L
SAC1 like phosphatidylinositide phosphatase.
   
 
 0.934
PIK3C2B
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta.
    
 0.931
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.929
ENSODEP00000006636
annotation not available
 
 
 
  0.927
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.926
PIK3C2A
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha.
    
 0.925
ENSODEP00000014715
annotation not available
    
 0.925
INPP4B
Inositol polyphosphate-4-phosphatase type II B.
   
 
 0.923
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
   
 
 0.923
MTMR14
Myotubularin related protein 14.
     
 0.920
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.