STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACNG7Calcium voltage-gated channel auxiliary subunit gamma 7. (275 aa)    
Predicted Functional Partners:
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.976
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.975
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.973
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.973
ENSODEP00000012875
annotation not available
   
 0.956
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
   
 0.955
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
     
 0.949
CNIH3
Cornichon family AMPA receptor auxiliary protein 3.
   
 0.943
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
     
 0.942
ENSODEP00000011533
annotation not available
   
 0.941
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.