STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRCC1Leucine rich repeat and coiled-coil centrosomal protein 1. (1028 aa)    
Predicted Functional Partners:
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 0.930
ADGRL2
Adhesion G protein-coupled receptor L2.
    
 0.930
ADGRL1
Adhesion G protein-coupled receptor L1.
    
 0.930
ENSODEP00000000348
annotation not available
    
 0.912
ENSODEP00000012333
annotation not available
    
 0.912
NTNG1
Netrin G1.
    
 0.895
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.866
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.866
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.866
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.866
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.