ENSODEP00000001405 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

ENSODEP00000001405

annotation not available (97 aa)

Predicted Functional Partners:

S100A14

0.952

S100A1

0.942

ENSODEP00000001460

0.939

LOC101579326

0.939

ENSODEP00000011346

0.939

ENSODEP00000020749

0.929

ENSODEP00000023952

0.929

S100A8

0.922

S100A3

0.919

S100A4

0.910

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000001405	ENSODEP00000001460	ENSODEP00000001405	ENSODEP00000001460	annotation not available	annotation not available	0.939
ENSODEP00000001405	ENSODEP00000011346	ENSODEP00000001405	ENSODEP00000011346	annotation not available	annotation not available	0.939
ENSODEP00000001405	ENSODEP00000020749	ENSODEP00000001405	ENSODEP00000020749	annotation not available	annotation not available	0.929
ENSODEP00000001405	ENSODEP00000023952	ENSODEP00000001405	ENSODEP00000023952	annotation not available	annotation not available	0.929
ENSODEP00000001405	LOC101579326	ENSODEP00000001405	ENSODEP00000004501	annotation not available	Annexin A1.	0.939
ENSODEP00000001405	S100A1	ENSODEP00000001405	ENSODEP00000016761	annotation not available	S100 calcium binding protein A1.	0.942
ENSODEP00000001405	S100A14	ENSODEP00000001405	ENSODEP00000017627	annotation not available	S100 calcium binding protein A14.	0.952
ENSODEP00000001405	S100A3	ENSODEP00000001405	ENSODEP00000017822	annotation not available	S100 calcium binding protein A3.	0.919
ENSODEP00000001405	S100A4	ENSODEP00000001405	ENSODEP00000017296	annotation not available	S100 calcium binding protein A4.	0.910
ENSODEP00000001405	S100A8	ENSODEP00000001405	ENSODEP00000014215	annotation not available	S100 calcium binding protein A8.	0.922
ENSODEP00000001460	ENSODEP00000001405	ENSODEP00000001460	ENSODEP00000001405	annotation not available	annotation not available	0.939
ENSODEP00000001460	ENSODEP00000020749	ENSODEP00000001460	ENSODEP00000020749	annotation not available	annotation not available	0.973
ENSODEP00000001460	ENSODEP00000023952	ENSODEP00000001460	ENSODEP00000023952	annotation not available	annotation not available	0.973
ENSODEP00000001460	S100A1	ENSODEP00000001460	ENSODEP00000016761	annotation not available	S100 calcium binding protein A1.	0.422
ENSODEP00000001460	S100A4	ENSODEP00000001460	ENSODEP00000017296	annotation not available	S100 calcium binding protein A4.	0.939
ENSODEP00000011346	ENSODEP00000001405	ENSODEP00000011346	ENSODEP00000001405	annotation not available	annotation not available	0.939
ENSODEP00000011346	ENSODEP00000020749	ENSODEP00000011346	ENSODEP00000020749	annotation not available	annotation not available	0.973
ENSODEP00000011346	ENSODEP00000023952	ENSODEP00000011346	ENSODEP00000023952	annotation not available	annotation not available	0.973
ENSODEP00000011346	S100A1	ENSODEP00000011346	ENSODEP00000016761	annotation not available	S100 calcium binding protein A1.	0.422
ENSODEP00000011346	S100A4	ENSODEP00000011346	ENSODEP00000017296	annotation not available	S100 calcium binding protein A4.	0.939