STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001408annotation not available (2547 aa)    
Predicted Functional Partners:
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.991
SPTBN2
Spectrin beta, non-erythrocytic 2.
   
0.984
SPTBN1
Spectrin beta, non-erythrocytic 1.
    
0.980
SPTA1
Spectrin alpha, erythrocytic 1.
   
0.976
ENSODEP00000000321
annotation not available
   
 0.961
ENSODEP00000000366
annotation not available
   
 0.961
ENSODEP00000000301
annotation not available
   
 0.956
ENSODEP00000013288
annotation not available
   
 0.885
ENSODEP00000015035
annotation not available
   
 0.885
ANK1
Ankyrin 1.
   
 0.877
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.