STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF496Zinc finger protein 496. (506 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.846
ARR3
Arrestin 3.
    
  0.815
ENSODEP00000025351
annotation not available
    
 0.797
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.795
SUFU
SUFU negative regulator of hedgehog signaling.
   
 0.793
NYNRIN
NYN domain and retroviral integrase containing.
    
 0.773
ENSODEP00000016345
annotation not available
   
 0.724
TRIM28
Tripartite motif containing 28.
    
 0.716
KDM2A
Lysine demethylase 2A.
   
 0.703
KDM6A
Lysine demethylase 6A.
    
 0.698
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.