STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP4BLa ribonucleoprotein 4B. (722 aa)    
Predicted Functional Partners:
LARP1
La ribonucleoprotein 1, translational regulator.
   
0.946
NUFIP2
Nuclear FMR1 interacting protein 2.
  
 
 0.929
DHX9
DExH-box helicase 9.
    
 0.921
ENSODEP00000001634
annotation not available
   
0.903
ENSODEP00000003103
annotation not available
   
 0.903
DHX29
DExH-box helicase 29.
    
 0.898
ABCF1
ATP binding cassette subfamily F member 1.
     
 0.890
ENSODEP00000001136
annotation not available
     
 0.869
ENSODEP00000025543
annotation not available
     
 0.869
DHX36
DEAH-box helicase 36.
   
 0.860
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.