Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LARP4BLa ribonucleoprotein 4B. (722 aa)    
Predicted Functional Partners:
LARP4
La ribonucleoprotein 4.
   
 
 0.864
ENSODEP00000000053
annotation not available
    
 
 0.800
ENSODEP00000001951
annotation not available
    
 
 0.800
Rack1
annotation not available
    
 
 0.800
ENSODEP00000003357
annotation not available
    
 
 0.800
ENSODEP00000003595
annotation not available
    
 
 0.800
ENSODEP00000011394
annotation not available
    
 
 0.800
ENSODEP00000013046
annotation not available
    
 
 0.800
ENSODEP00000015639
annotation not available
    
 
 0.800
ENSODEP00000022101
annotation not available
    
 
 0.800
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.