Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MZF1Myeloid zinc finger 1. (738 aa)    
Predicted Functional Partners:
ENSODEP00000001089
annotation not available
    
   0.889
SCAND1
SCAN domain containing 1.
    
 
 0.882
ENSODEP00000025351
annotation not available
    
 0.783
ZNF213
Zinc finger protein 213.
    
   0.768
USF2
Upstream transcription factor 2, c-fos interacting.
    
 0.714
SOX15
SRY-box transcription factor 15.
    
 0.714
NME8
NME/NM23 family member 8.
    
 0.692
GART
annotation not available
     
  0.675
GATA1
GATA binding protein 1.
    
 0.671
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.671
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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