Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCN9ASodium voltage-gated channel alpha subunit 9. (1985 aa)    
Predicted Functional Partners:
ENSODEP00000026814
annotation not available
   
 
  0.995
SCN3A
Sodium channel protein type 3 subunit alpha.
  
0.994
SCN1B
Sodium voltage-gated channel beta subunit 1.
    
 0.994
SCN5A
Sodium voltage-gated channel alpha subunit 5.
  
 
0.990
SCN4B
Sodium voltage-gated channel beta subunit 4.
    
 0.986
SCN2B
Sodium voltage-gated channel beta subunit 2.
   
 0.981
ENSODEP00000002263
annotation not available
   
 0.977
ENSODEP00000002345
annotation not available
   
 0.977
SCN3B
Sodium voltage-gated channel beta subunit 3.
    
 0.965
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.960
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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