STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GABRA4Gamma-aminobutyric acid type A receptor alpha4 subunit. (574 aa)    
Predicted Functional Partners:
GPHN
Gephyrin.
    
 0.986
GABRB3
Gamma-aminobutyric acid type A receptor beta3 subunit.
   
 0.980
GABRG2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
   
 0.978
GABRD
Gamma-aminobutyric acid type A receptor delta subunit.
   
 0.975
PLCL1
Phospholipase C like 1 (inactive).
     
 0.966
GABARAPL1
GABA type A receptor associated protein like 1.
    
 0.965
GABARAP
GABA type A receptor-associated protein.
    
 0.965
TRAK2
Trafficking kinesin protein 2.
     
 0.960
ENSODEP00000001327
annotation not available
    
 0.950
ENSODEP00000007770
annotation not available
    
 0.950
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.