STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABRA4Gamma-aminobutyric acid type A receptor alpha4 subunit. (574 aa)    
Predicted Functional Partners:
GABRD
Gamma-aminobutyric acid type A receptor delta subunit.
  
0.993
GABRB3
Gamma-aminobutyric acid type A receptor beta3 subunit.
  
0.992
GABRB1
Gamma-aminobutyric acid type A receptor beta1 subunit.
   
0.982
GABRG2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
   
0.982
GABRG1
Gamma-aminobutyric acid type A receptor gamma1 subunit.
  
0.981
GABRB2
Gamma-aminobutyric acid type A receptor beta2 subunit.
   
0.974
GABRP
Gamma-aminobutyric acid type A receptor pi subunit.
   
0.970
GABRR2
Gamma-aminobutyric acid type A receptor rho2 subunit.
  
0.969
GABRR1
Gamma-aminobutyric acid type A receptor rho1 subunit.
  
0.969
GABARAPL1
GABA type A receptor associated protein like 1.
    
 0.957
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.