STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANGPT1Angiopoietin 1. (462 aa)    
Predicted Functional Partners:
TEK
TEK receptor tyrosine kinase.
   
 0.999
ENSODEP00000000264
annotation not available
    
 
0.985
KDR
Kinase insert domain receptor.
   
 0.985
TIE1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
   
 0.983
ANGPT2
Angiopoietin 2.
     
 0.982
PDGFRB
Platelet derived growth factor receptor beta.
    
 0.982
FLT4
Fms related tyrosine kinase 4.
   
 0.979
NTRK1
Neurotrophic receptor tyrosine kinase 1.
    
 0.978
PDGFRA
Platelet derived growth factor receptor alpha.
    
 0.975
KIT
KIT proto-oncogene, receptor tyrosine kinase.
   
 0.975
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.