STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001430annotation not available (285 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.894
SPAG17
Sperm associated antigen 17.
    
 
 0.827
CCDC189
Coiled-coil domain containing 189.
    
 
 0.815
ENSODEP00000009343
annotation not available
    
 
 0.785
CFAP74
Cilia and flagella associated protein 74.
    
 
 0.775
POLR3C
RNA polymerase III subunit C.
    
   0.772
CFAP69
Cilia and flagella associated protein 69.
    
   0.772
Dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.715
ENSODEP00000013431
annotation not available
    
 
 0.715
LOC101567559
c-Myc-binding protein-like.
    
 
 0.714
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.