STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCKIQ motif containing K. (279 aa)    
Predicted Functional Partners:
SNX9
Sorting nexin 9.
      
 0.866
IDH2
Isocitrate dehydrogenase (NADP(+)) 2.
      
 0.834
CCDC150
Coiled-coil domain containing 150.
      
 0.688
NIPBL
NIPBL cohesin loading factor.
    
   0.661
EFCAB11
EF-hand calcium binding domain 11.
      
 0.622
MCTP1
Multiple C2 and transmembrane domain containing 1.
      
 0.620
SEMA5B
Semaphorin 5B.
      
 0.619
SLC49A4
Solute carrier family 49 member 4.
      
 0.619
OARD1
O-acyl-ADP-ribose deacylase 1.
      
 0.619
SEMA5A
Semaphorin 5A.
      
 0.619
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.