STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCKIQ motif containing K. (279 aa)    
Predicted Functional Partners:
SNX9
Sorting nexin 9.
      
 0.550
CCDC150
Coiled-coil domain containing 150.
      
 0.545
SLC49A4
Solute carrier family 49 member 4.
      
 0.542
EFCAB11
EF-hand calcium binding domain 11.
      
 0.523
IDH2
Isocitrate dehydrogenase (NADP(+)) 2.
      
 0.483
FAM181A
Family with sequence similarity 181 member A.
      
 0.479
MCTP1
Multiple C2 and transmembrane domain containing 1.
      
 0.478
PLK4
Polo like kinase 4.
      
 0.461
SLITRK6
SLIT and NTRK like family member 6.
      
 0.457
MAP4K3
Mitogen-activated protein kinase kinase kinase kinase 3.
      
 0.457
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.