STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC93AUnc-93 homolog A. (456 aa)    
Predicted Functional Partners:
ENSODEP00000024612
annotation not available
   
 
 0.957
SLC35E4
Solute carrier family 35 member E4.
    
 
 0.837
TLR7
Toll like receptor 7.
    
 0.755
ENSODEP00000005961
annotation not available
    
 0.734
TLR4
Toll like receptor 4.
    
 0.734
CD180
CD180 molecule.
    
 0.734
LOC101569128
Twinfilin-2.
    
 0.734
ENSODEP00000011039
annotation not available
    
 
 0.719
MCPH1
Microcephalin 1.
   
 
 0.711
LINGO3
Leucine rich repeat and Ig domain containing 3.
    
 0.671
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.