STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABRAActin binding Rho activating protein. (376 aa)    
Predicted Functional Partners:
MYOZ2
Myozenin 2.
   
    0.860
ABLIM3
Actin binding LIM protein family member 3.
    
 
 0.645
ABLIM2
Actin binding LIM protein family member 2.
    
 
 0.644
ABLIM1
Actin binding LIM protein 1.
    
 
 0.611
NRAP
Nebulin related anchoring protein.
   
    0.575
ITGB1BP2
Integrin subunit beta 1 binding protein 2.
   
  
 0.508
LMOD3
Leiomodin 3.
   
   0.496
LMOD2
Leiomodin 2.
   
   0.496
TMOD3
Tropomodulin 3.
   
   0.466
DMTN
Dematin actin binding protein.
    
 
 0.454
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.