STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK6Cyclin dependent kinase 6. (326 aa)    
Predicted Functional Partners:
Ccnd2
annotation not available
   
 0.999
CDKN2B
Cyclin dependent kinase inhibitor 2B.
    
 0.999
RB1
RB transcriptional corepressor 1.
   
 0.999
CDKN2C
Cyclin dependent kinase inhibitor 2C.
   
 0.999
CDKN1B
Cyclin dependent kinase inhibitor 1B.
   
 0.999
CCNE1
Cyclin E1.
   
 0.999
CDKN1A
Cyclin dependent kinase inhibitor 1A.
   
 0.999
CDKN2D
Cyclin dependent kinase inhibitor 2D.
    
 0.999
CCND1
Cyclin D1.
   
 0.999
CDK2
Cyclin dependent kinase 2.
   
 0.998
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.