Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SENP2SUMO specific peptidase 2. (589 aa)    
Predicted Functional Partners:
RANGAP1
Ran GTPase activating protein 1.
    
 
 0.976
DVL1
Dishevelled segment polarity protein 1.
    
  0.962
DVL3
Dishevelled segment polarity protein 3.
    
  0.962
DVL2
Dishevelled segment polarity protein 2.
    
  0.962
ENSODEP00000009070
annotation not available
    
 0.959
ENSODEP00000017611
annotation not available
    
 0.959
ENSODEP00000017941
annotation not available
    
 0.959
ENSODEP00000025867
annotation not available
    
 0.959
ENSODEP00000026261
annotation not available
    
 0.959
NUP153
Nucleoporin 153.
   
 
 0.949
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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