Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RUNDC3BRUN domain containing 3B. (351 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance associated.
    
 0.912
AP2S1
Adaptor related protein complex 2 subunit sigma 1.
    
   0.805
AP2A2
Adaptor related protein complex 2 subunit alpha 2.
    
 
 0.775
AP2M1
Adaptor related protein complex 2 subunit mu 1.
   
   0.771
AP2A1
Adaptor related protein complex 2 subunit alpha 1.
    
   0.744
RALBP1
ralA binding protein 1.
    
   0.725
BMP2K
BMP2 inducible kinase.
    
   0.705
AAK1
AP2 associated kinase 1.
    
   0.705
ENSODEP00000002215
annotation not available
   
 
  0.697
ENSODEP00000002622
annotation not available
   
 
  0.697
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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