STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXL7F-box and leucine rich repeat protein 7. (491 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
    
 0.978
PRKG1
Protein kinase cGMP-dependent 1.
   
  
 0.975
ENSODEP00000026454
annotation not available
    
 
 0.956
ENSODEP00000000769
annotation not available
    
 0.940
ENSODEP00000011191
annotation not available
    
 0.940
ENSODEP00000002574
annotation not available
    
 0.914
ENSODEP00000009890
annotation not available
    
 0.914
SKP1
S-phase kinase associated protein 1.
    
 0.914
ENSODEP00000024658
annotation not available
    
 0.914
LOC101588632
annotation not available
    
 0.914
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.