STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001472annotation not available (392 aa)    
Predicted Functional Partners:
CAAP1
Caspase activity and apoptosis inhibitor 1.
   
   0.880
NOS1AP
Nitric oxide synthase 1 adaptor protein.
    
   0.817
ENSODEP00000003270
annotation not available
    
   0.647
ENSODEP00000005090
annotation not available
    
   0.647
ENSODEP00000023558
annotation not available
    
   0.647
SRRM2
Serine/arginine repetitive matrix 2.
   
   0.646
SRRM3
Serine/arginine repetitive matrix 3.
   
   0.646
BRD3
Bromodomain containing 3.
    
   0.582
BRD2
Bromodomain containing 2.
    
   0.582
PLCXD1
Phosphatidylinositol specific phospholipase C X domain containing 1.
      
 0.581
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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