STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001474annotation not available (98 aa)    
Predicted Functional Partners:
ENSODEP00000016536
annotation not available
    
 0.906
RBM47
RNA binding motif protein 47.
    
 0.863
APOBEC4
Apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4.
     
 0.834
APOBEC2
Apolipoprotein B mRNA editing enzyme catalytic subunit 2.
    
 0.780
UNG
Uracil DNA glycosylase.
     
 0.768
AICDA
Activation induced cytidine deaminase.
     
0.688
LOC101574617
Probable RNA-binding protein 46.
    
 0.668
ENSODEP00000001036
annotation not available
    
 0.668
LOC101586357
Dead end protein homolog 1-like.
    
 0.668
ENSODEP00000006558
annotation not available
    
 0.668
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.