ENSODEP00000001477 protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

Assay-based Predictions

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co-expression

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gene co-occurrence

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[Homology]

Score

ENSODEP00000001477

annotation not available (304 aa)

Predicted Functional Partners:

HNRNPD

0.968

SYNCRIP

0.962

ENSODEP00000000796

0.942

ENSODEP00000007327

0.942

ENSODEP00000007709

0.942

ENSODEP00000011795

0.942

ENSODEP00000012590

0.942

ENSODEP00000025317

0.942

ENSODEP00000002853

0.941

HNRNPU

0.941

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000000796	ENSODEP00000001477	ENSODEP00000000796	ENSODEP00000001477	annotation not available	annotation not available	0.942
ENSODEP00000000796	ENSODEP00000002853	ENSODEP00000000796	ENSODEP00000002853	annotation not available	annotation not available	0.959
ENSODEP00000000796	HNRNPD	ENSODEP00000000796	ENSODEP00000002437	annotation not available	Heterogeneous nuclear ribonucleoprotein D.	0.963
ENSODEP00000000796	HNRNPU	ENSODEP00000000796	ENSODEP00000019595	annotation not available	Heterogeneous nuclear ribonucleoprotein U.	0.959
ENSODEP00000000796	SYNCRIP	ENSODEP00000000796	ENSODEP00000011810	annotation not available	Synaptotagmin binding cytoplasmic RNA interacting protein.	0.971
ENSODEP00000001477	ENSODEP00000000796	ENSODEP00000001477	ENSODEP00000000796	annotation not available	annotation not available	0.942
ENSODEP00000001477	ENSODEP00000002853	ENSODEP00000001477	ENSODEP00000002853	annotation not available	annotation not available	0.941
ENSODEP00000001477	ENSODEP00000007327	ENSODEP00000001477	ENSODEP00000007327	annotation not available	annotation not available	0.942
ENSODEP00000001477	ENSODEP00000007709	ENSODEP00000001477	ENSODEP00000007709	annotation not available	annotation not available	0.942
ENSODEP00000001477	ENSODEP00000011795	ENSODEP00000001477	ENSODEP00000011795	annotation not available	annotation not available	0.942
ENSODEP00000001477	ENSODEP00000012590	ENSODEP00000001477	ENSODEP00000012590	annotation not available	annotation not available	0.942
ENSODEP00000001477	ENSODEP00000025317	ENSODEP00000001477	ENSODEP00000025317	annotation not available	annotation not available	0.942
ENSODEP00000001477	HNRNPD	ENSODEP00000001477	ENSODEP00000002437	annotation not available	Heterogeneous nuclear ribonucleoprotein D.	0.968
ENSODEP00000001477	HNRNPU	ENSODEP00000001477	ENSODEP00000019595	annotation not available	Heterogeneous nuclear ribonucleoprotein U.	0.941
ENSODEP00000001477	SYNCRIP	ENSODEP00000001477	ENSODEP00000011810	annotation not available	Synaptotagmin binding cytoplasmic RNA interacting protein.	0.962
ENSODEP00000002853	ENSODEP00000000796	ENSODEP00000002853	ENSODEP00000000796	annotation not available	annotation not available	0.959
ENSODEP00000002853	ENSODEP00000001477	ENSODEP00000002853	ENSODEP00000001477	annotation not available	annotation not available	0.941
ENSODEP00000002853	ENSODEP00000007327	ENSODEP00000002853	ENSODEP00000007327	annotation not available	annotation not available	0.959
ENSODEP00000002853	ENSODEP00000007709	ENSODEP00000002853	ENSODEP00000007709	annotation not available	annotation not available	0.959
ENSODEP00000002853	ENSODEP00000011795	ENSODEP00000002853	ENSODEP00000011795	annotation not available	annotation not available	0.959