STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRAF2PRA1 domain family member 2. (178 aa)    
Predicted Functional Partners:
ARL6IP5
ADP ribosylation factor like GTPase 6 interacting protein 5.
   
   0.823
WDFY2
WD repeat and FYVE domain containing 2.
    
 
 0.816
SYNGAP1
Synaptic Ras GTPase activating protein 1.
    
   0.769
Wdfy1
annotation not available
    
 
 0.736
DLK1
Delta like non-canonical Notch ligand 1.
    
   0.628
FAM241B
Family with sequence similarity 241 member B.
    
   0.619
DAB2IP
DAB2 interacting protein.
    
   0.575
RASAL2
RAS protein activator like 2.
    
   0.575
ENSODEP00000015393
annotation not available
    
   0.575
DERL3
Derlin 3.
   
   0.555
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.