Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COG5Component of oligomeric golgi complex 5. (773 aa)    
Predicted Functional Partners:
COG6
Component of oligomeric golgi complex 6.
   
 0.999
ENSODEP00000006762
annotation not available
   
 0.999
COG3
Component of oligomeric golgi complex 3.
   
 0.999
COG1
Conserved oligomeric Golgi complex subunit 1.
   
 0.999
COG7
Component of oligomeric golgi complex 7.
   
 0.999
Cog8
annotation not available
   
 0.999
ENSODEP00000019893
annotation not available
   
 0.997
ENSODEP00000025052
annotation not available
   
 0.995
TPX2
TPX2 microtubule nucleation factor.
   
 0.988
SMIM7
Small integral membrane protein 7.
   
 0.964
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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