FNIP2 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

FNIP2

Folliculin interacting protein 2. (1048 aa)

Predicted Functional Partners:

FLCN

0.999

FNIP1

0.998

RRAGC

0.997

RRAGD

0.995

RRAGA

0.989

RRAGB

0.984

LAMTOR2

0.929

ENSODEP00000007460

0.913

ENSODEP00000026022

0.913

ENSODEP00000022796

0.905

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000007460	ENSODEP00000022796	ENSODEP00000007460	ENSODEP00000022796	annotation not available	annotation not available	0.995
ENSODEP00000007460	ENSODEP00000026022	ENSODEP00000007460	ENSODEP00000026022	annotation not available	annotation not available	0.544
ENSODEP00000007460	FLCN	ENSODEP00000007460	ENSODEP00000011171	annotation not available	Folliculin.	0.926
ENSODEP00000007460	FNIP1	ENSODEP00000007460	ENSODEP00000013094	annotation not available	Folliculin interacting protein 1.	0.617
ENSODEP00000007460	FNIP2	ENSODEP00000007460	ENSODEP00000001501	annotation not available	Folliculin interacting protein 2.	0.913
ENSODEP00000007460	LAMTOR2	ENSODEP00000007460	ENSODEP00000013727	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.997
ENSODEP00000007460	RRAGA	ENSODEP00000007460	ENSODEP00000026789	annotation not available	Ras related GTP binding A.	0.984
ENSODEP00000007460	RRAGB	ENSODEP00000007460	ENSODEP00000003850	annotation not available	Ras related GTP binding B.	0.983
ENSODEP00000007460	RRAGC	ENSODEP00000007460	ENSODEP00000009144	annotation not available	Ras related GTP binding C.	0.994
ENSODEP00000007460	RRAGD	ENSODEP00000007460	ENSODEP00000010112	annotation not available	Ras related GTP binding D.	0.994
ENSODEP00000022796	ENSODEP00000007460	ENSODEP00000022796	ENSODEP00000007460	annotation not available	annotation not available	0.995
ENSODEP00000022796	ENSODEP00000026022	ENSODEP00000022796	ENSODEP00000026022	annotation not available	annotation not available	0.995
ENSODEP00000022796	FLCN	ENSODEP00000022796	ENSODEP00000011171	annotation not available	Folliculin.	0.916
ENSODEP00000022796	FNIP2	ENSODEP00000022796	ENSODEP00000001501	annotation not available	Folliculin interacting protein 2.	0.905
ENSODEP00000022796	LAMTOR2	ENSODEP00000022796	ENSODEP00000013727	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.997
ENSODEP00000022796	RRAGA	ENSODEP00000022796	ENSODEP00000026789	annotation not available	Ras related GTP binding A.	0.984
ENSODEP00000022796	RRAGB	ENSODEP00000022796	ENSODEP00000003850	annotation not available	Ras related GTP binding B.	0.984
ENSODEP00000022796	RRAGC	ENSODEP00000022796	ENSODEP00000009144	annotation not available	Ras related GTP binding C.	0.994
ENSODEP00000022796	RRAGD	ENSODEP00000022796	ENSODEP00000010112	annotation not available	Ras related GTP binding D.	0.993
ENSODEP00000026022	ENSODEP00000007460	ENSODEP00000026022	ENSODEP00000007460	annotation not available	annotation not available	0.544