Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001502annotation not available (278 aa)    
Predicted Functional Partners:
ENSODEP00000008366
annotation not available
   
 
 0.965
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.963
WDR74
WD repeat domain 74.
   
 
 0.962
RRP1B
Ribosomal RNA processing 1B.
   
 
 0.958
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.955
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 
 0.953
WDR12
WD repeat domain 12.
   
 
 0.950
RSL24D1
Ribosomal L24 domain containing 1.
   
 
 0.948
BOP1
BOP1 ribosomal biogenesis factor.
   
 
 0.948
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.946
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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