ENSODEP00000001502 protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSODEP00000001502

annotation not available (278 aa)

Predicted Functional Partners:

EBNA1BP2

0.998

WDR74

0.998

PES1

0.998

RSL24D1

0.998

ENSODEP00000008366

0.998

DDX18

0.998

FTSJ3

0.998

NOC2L

0.998

WDR12

0.998

RRP1B

0.998

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX18	EBNA1BP2	ENSODEP00000009802	ENSODEP00000002397	DEAD-box helicase 18.	EBNA1 binding protein 2.	0.999
DDX18	ENSODEP00000001502	ENSODEP00000009802	ENSODEP00000001502	DEAD-box helicase 18.	annotation not available	0.998
DDX18	ENSODEP00000008366	ENSODEP00000009802	ENSODEP00000008366	DEAD-box helicase 18.	annotation not available	0.999
DDX18	FTSJ3	ENSODEP00000009802	ENSODEP00000010965	DEAD-box helicase 18.	FtsJ RNA 2'-O-methyltransferase 3.	0.999
DDX18	NOC2L	ENSODEP00000009802	ENSODEP00000012820	DEAD-box helicase 18.	NOC2 like nucleolar associated transcriptional repressor.	0.999
DDX18	PES1	ENSODEP00000009802	ENSODEP00000004180	DEAD-box helicase 18.	Pescadillo ribosomal biogenesis factor 1.	0.999
DDX18	RRP1B	ENSODEP00000009802	ENSODEP00000017866	DEAD-box helicase 18.	Ribosomal RNA processing 1B.	0.999
DDX18	RSL24D1	ENSODEP00000009802	ENSODEP00000007273	DEAD-box helicase 18.	Ribosomal L24 domain containing 1.	0.999
DDX18	WDR12	ENSODEP00000009802	ENSODEP00000015728	DEAD-box helicase 18.	WD repeat domain 12.	0.999
DDX18	WDR74	ENSODEP00000009802	ENSODEP00000004104	DEAD-box helicase 18.	WD repeat domain 74.	0.999
EBNA1BP2	DDX18	ENSODEP00000002397	ENSODEP00000009802	EBNA1 binding protein 2.	DEAD-box helicase 18.	0.999
EBNA1BP2	ENSODEP00000001502	ENSODEP00000002397	ENSODEP00000001502	EBNA1 binding protein 2.	annotation not available	0.998
EBNA1BP2	ENSODEP00000008366	ENSODEP00000002397	ENSODEP00000008366	EBNA1 binding protein 2.	annotation not available	0.999
EBNA1BP2	FTSJ3	ENSODEP00000002397	ENSODEP00000010965	EBNA1 binding protein 2.	FtsJ RNA 2'-O-methyltransferase 3.	0.999
EBNA1BP2	NOC2L	ENSODEP00000002397	ENSODEP00000012820	EBNA1 binding protein 2.	NOC2 like nucleolar associated transcriptional repressor.	0.999
EBNA1BP2	PES1	ENSODEP00000002397	ENSODEP00000004180	EBNA1 binding protein 2.	Pescadillo ribosomal biogenesis factor 1.	0.999
EBNA1BP2	RRP1B	ENSODEP00000002397	ENSODEP00000017866	EBNA1 binding protein 2.	Ribosomal RNA processing 1B.	0.999
EBNA1BP2	RSL24D1	ENSODEP00000002397	ENSODEP00000007273	EBNA1 binding protein 2.	Ribosomal L24 domain containing 1.	0.999
EBNA1BP2	WDR12	ENSODEP00000002397	ENSODEP00000015728	EBNA1 binding protein 2.	WD repeat domain 12.	0.999
EBNA1BP2	WDR74	ENSODEP00000002397	ENSODEP00000004104	EBNA1 binding protein 2.	WD repeat domain 74.	0.999