STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKCGProtein kinase C gamma. (697 aa)    
Predicted Functional Partners:
NCF1
Neutrophil cytosolic factor 1.
   
 0.987
TRPC3
Transient receptor potential cation channel subfamily C member 3.
   
 0.986
PLCB1
Phospholipase C beta 1.
    
 0.986
MTOR
Mechanistic target of rapamycin kinase.
    
 0.983
GNB2
G protein subunit beta 2.
   
 0.983
GNB5
G protein subunit beta 5.
   
 0.982
ADCY8
Adenylate cyclase 8.
    
 0.978
ENSODEP00000011384
annotation not available
   
  0.978
ENSODEP00000018918
annotation not available
   
  0.978
PRKCB
Protein kinase C beta.
   
  0.978
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.