STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC120Coiled-coil domain containing 120. (632 aa)    
Predicted Functional Partners:
CYTH2
Cytohesin 2.
    
 
 0.976
ENSODEP00000018473
annotation not available
    
 0.886
ENSODEP00000020131
annotation not available
    
 0.886
ENSODEP00000021970
annotation not available
    
 0.886
SAV1
Salvador family WW domain containing protein 1.
    
 0.879
CYTH3
Cytohesin 3.
    
 
 0.863
FRMD6
FERM domain containing 6.
    
 0.829
CEP170B
Centrosomal protein 170B.
    
 0.822
CYTH4
Cytohesin 4.
    
 
 0.818
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.803
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.