STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001513annotation not available (302 aa)    
Predicted Functional Partners:
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
    
 
 0.896
ENSODEP00000012201
annotation not available
   
 
 0.848
ENSODEP00000015704
annotation not available
    
 
 0.845
ENSODEP00000017800
annotation not available
    
 
 0.845
GYS1
Glycogen synthase 1.
    
 
 0.833
GYS2
Glycogen synthase 2.
    
 
 0.811
PYGB
Glycogen phosphorylase B.
    
 
 0.790
PYGL
Glycogen phosphorylase L.
    
 
 0.790
PYGM
Glycogen phosphorylase, muscle associated.
    
 
 0.790
CTU2
Cytosolic thiouridylase subunit 2.
   
 
 0.785
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.