Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C6orf118Chromosome 6 open reading frame 118. (403 aa)    
Predicted Functional Partners:
ISG20L2
Interferon stimulated exonuclease gene 20 like 2.
    
   0.841
ISG20
Interferon stimulated exonuclease gene 20.
    
   0.666
Aen
Apoptosis enhancing nuclease.
    
   0.666
TTC29
Tetratricopeptide repeat domain 29.
   
    0.591
REXO4
REX4 homolog, 3'-5' exonuclease.
    
   0.573
TSNAXIP1
Translin associated factor X interacting protein 1.
   
  
 0.497
SFT2D1
SFT2 domain containing 1.
      
 0.421
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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