Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001523annotation not available (440 aa)    
Predicted Functional Partners:
ROCK1
Rho associated coiled-coil containing protein kinase 1.
   
 0.999
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
   
 0.996
LIMK2
LIM domain kinase 2.
    
 0.991
LIMK1
LIM domain kinase 1.
    
 0.991
PPP1R12C
Protein phosphatase 1 regulatory subunit 12C.
   
 0.990
MYL2
Myosin light chain 2.
    
 0.987
GAB1
GRB2 associated binding protein 1.
   
  0.985
MYL10
Myosin light chain 10.
    
 0.983
PTEN
Phosphatase and tensin homolog.
   
 0.978
MYL7
Myosin light chain 7.
    
 0.975
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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