Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001534annotation not available (197 aa)    
Predicted Functional Partners:
COMMD4
COMM domain containing 4.
   
 0.988
COMMD2
COMM domain containing 2.
   
 0.987
CCDC22
Coiled-coil domain containing 22.
    
 0.986
COMMD9
COMM domain containing 9.
   
 0.986
ENSODEP00000025684
annotation not available
   
 0.986
ENSODEP00000020312
annotation not available
   
 0.976
ENSODEP00000008704
annotation not available
   
 0.972
ENSODEP00000025695
annotation not available
   
 0.972
CCDC93
Coiled-coil domain containing 93.
    
 
 0.967
ENSODEP00000003327
annotation not available
   
 0.965
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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