STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF6DDB1 and CUL4 associated factor 6. (856 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.994
CUL4A
Cullin 4A.
    
 0.989
CUL4B
Cullin 4B.
    
 0.987
DCAF7
DDB1 and CUL4 associated factor 7.
    
 0.958
ENSODEP00000001919
annotation not available
    
 0.941
DCAF5
DDB1 and CUL4 associated factor 5.
     
 0.919
DCAF11
DDB1 and CUL4 associated factor 11.
    
 0.903
DCAF12
DDB1 and CUL4 associated factor 12.
     
 0.891
TRPC4AP
Transient receptor potential cation channel subfamily C member 4 associated protein.
    
 0.883
DCAF10
DDB1 and CUL4 associated factor 10.
     
 0.883
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.