Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R14CProtein phosphatase 1 regulatory inhibitor subunit 14C. (159 aa)    
Predicted Functional Partners:
PPP1R14A
Protein phosphatase 1 regulatory inhibitor subunit 14A.
    
 
 0.874
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.798
SHANK1
SH3 and multiple ankyrin repeat domains 1.
    
 0.798
ENSODEP00000023183
annotation not available
      
 0.757
NSUN2
NOP2/Sun RNA methyltransferase 2.
    
   0.711
PRKCI
Protein kinase C iota.
    
 0.690
PRKCZ
Protein kinase C zeta.
    
 0.690
ENSODEP00000024701
annotation not available
    
 
 0.669
CNKSR1
Connector enhancer of kinase suppressor of Ras 1.
    
 0.655
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.646
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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