Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCARB2Scavenger receptor class B member 2. (478 aa)    
Predicted Functional Partners:
CD63
CD63 molecule.
    
 0.973
GBA
Glucosylceramidase beta.
   
 
 0.966
TMEM130
Transmembrane protein 130.
   
 
 0.913
APOB
Apolipoprotein B.
    
 0.888
TLR4
Toll like receptor 4.
   
 0.855
LDLR
Low density lipoprotein receptor.
    
 0.849
CD53
CD53 molecule.
    
 0.831
ENSODEP00000000209
annotation not available
   
 
 0.830
THBS1
Thrombospondin 1.
    
 0.823
ENSODEP00000005624
annotation not available
    
 0.813
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.