Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001576annotation not available (267 aa)    
Predicted Functional Partners:
TFDP2
Transcription factor Dp-2.
  
 0.992
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.992
PCGF6
Polycomb group ring finger 6.
    
 0.991
MGA
MAX dimerization protein MGA.
    
 0.984
RYBP
RING1 and YY1 binding protein.
   
 0.983
RNF2
Ring finger protein 2.
    
 0.982
YAF2
YY1 associated factor 2.
   
 0.978
ENSODEP00000012375
annotation not available
   
 0.971
ENSODEP00000026831
annotation not available
   
 0.971
MBTD1
Mbt domain containing 1.
    
 0.968
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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