STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001577annotation not available (180 aa)    
Predicted Functional Partners:
DERL1
Derlin 1.
    
 0.940
ERLIN2
ER lipid raft associated 2.
   
 0.929
CFTR
CF transmembrane conductance regulator.
    
 0.922
ERLIN1
ER lipid raft associated 1.
   
 0.917
TMUB1
Transmembrane and ubiquitin like domain containing 1.
    
 
 0.869
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
     
 0.830
AMFR
Autocrine motility factor receptor.
    
 
 0.825
ENSODEP00000026177
annotation not available
    
  0.819
ENSODEP00000026556
annotation not available
    
  0.819
STING1
Stimulator of interferon response cGAMP interactor 1.
    
 
 0.812
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.