STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001577annotation not available (180 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
   
 0.861
DERL1
Derlin 1.
    
 0.854
CFTR
CF transmembrane conductance regulator.
    
 0.846
ERLIN1
ER lipid raft associated 1.
   
 0.840
ENSODEP00000004882
annotation not available
  
  
 
0.827
ENSODEP00000025400
annotation not available
  
  
 
0.825
DERL3
Derlin 3.
    
 0.794
DERL2
Derlin 2.
    
 0.794
ENSODEP00000026177
annotation not available
    
  0.769
ENSODEP00000026556
annotation not available
    
  0.769
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.