STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERLEC1Endoplasmic reticulum lectin 1. (453 aa)    
Predicted Functional Partners:
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.995
SYVN1
Synoviolin 1.
   
 0.990
DERL2
Derlin 2.
   
 0.987
OS9
OS9 endoplasmic reticulum lectin.
   
 0.986
DERL1
Derlin 1.
   
 0.977
ENSODEP00000008093
annotation not available
   
 0.962
DERL3
Derlin 3.
   
 0.958
VCP
Valosin containing protein.
   
 0.957
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
   
 
 0.949
AMFR
Autocrine motility factor receptor.
   
 0.948
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.