STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLP1Proteolipid protein 1. (277 aa)    
Predicted Functional Partners:
ENSODEP00000003457
annotation not available
   
 
 0.933
ITGA5
Integrin subunit alpha 5.
    
 0.896
ENSODEP00000009397
annotation not available
    
  0.894
ENSODEP00000005624
annotation not available
    
  0.890
ITGA7
Integrin subunit alpha 7.
    
 0.887
ITGA9
Integrin subunit alpha 9.
    
 0.887
ITGA6
Integrin subunit alpha 6.
    
 0.887
ITGA3
Integrin subunit alpha 3.
    
 0.887
ITGB5
Integrin subunit beta 5.
    
  0.883
LYN
LYN proto-oncogene, Src family tyrosine kinase.
     
 0.874
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.