STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001589annotation not available (74 aa)    
Predicted Functional Partners:
ENSODEP00000009850
annotation not available
    
 0.950
ENSODEP00000018244
annotation not available
    
 0.901
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
    
 0.901
PIK3CA
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha.
     
 0.872
PIK3CD
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta.
     
 0.872
PIK3CB
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta.
     
 0.872
PPP2R2C
Protein phosphatase 2 regulatory subunit Bgamma.
    
  0.866
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
     
  0.864
PARD6G
Par-6 family cell polarity regulator gamma.
     
  0.864
PARD3
Par-3 family cell polarity regulator.
     
  0.864
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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