STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC1Leucine rich repeat containing 1. (504 aa)    
Predicted Functional Partners:
DLG3
Discs large MAGUK scaffold protein 3.
    
 0.974
UBE3A
Ubiquitin protein ligase E3A.
    
 0.969
DLG4
Discs large MAGUK scaffold protein 4.
    
 0.966
DLG2
Discs large MAGUK scaffold protein 2.
    
 0.958
DLG1
Discs large MAGUK scaffold protein 1.
    
 0.958
GIT1
GIT ArfGAP 1.
   
 0.941
LLGL1
LLGL scribble cell polarity complex component 1.
    
 0.931
LLGL2
LLGL scribble cell polarity complex component 2.
   
 0.929
DLG5
Discs large MAGUK scaffold protein 5.
    
 0.920
PAK2
P21 (RAC1) activated kinase 2.
    
 0.914
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.